Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015928231.1_cds_XP_016475862.1_67754
CDS Infomation

[gene=LOC107797476] [db_xref=GeneID:107797476] [protein=ubiquitin domain-containing protein DSK2b-like isoform X3] [protein_id=XP_016475862.1] [location=complement(join(12424..12572,12672..12752,13287..13315,13559..13617,14224..14337,14475..14689,15526..16287,22037..22289))] [gbkey=CDS]
Sequence

ATGAGTATGGTCGGCGGCGATTCAAACAAGGAGAATAACACCGGCGCCGGTGCCGGTGCT
GTTGCCGGCGAAGGTGTTACAATCAACGTTCGATGTTCCAACGGCTCGAAATTCTCCGTG
AAAGTTAACCTCGATTCGACTGTAGGATCCTTCAAGTCTATTCTTGTACAGCACGCAAAC
ATTCCTGCTGAAAATCAGAGATTGATCTATAAAGGCCGTATCTTAAAAGACGAGCAAACA
CTCGAAAGCTACGGTCTGGAGGCGGATCACACTGTGCATTTAATTCGAGGTTCTGGCCCA
GCTCCCTCTGCAAACCCTGCAAGTTCAACCAATGCTGGAGGTCCAAATACAGATCAGCAT
GCACCAAGAGATGCTGCTTCAAATGTAGGTGGGCCATTTCCGGGATCAGGCCTGGGAGTT
TCACTGTTTCCTGGTCTTGGAAGTGGTGGTGGTGGTGGTTTGTTTGGAGCTGGACTTCCA
GATTTTGAGCAGGTCCAGCAGCAGTTGACTCAAAACCCCAACATGATGAGAGATATGTTG
AATATGCCTCTTGTTCAGAATTTAATGAATAACCCTGAAACCATTCGTAACATGATCATG
AATAATCCCCAAATGCGAGAGATCATGGAGCGTAATCCCGAGCTTGCTCACGTACTCAAT
GATCCTGCTACTCTTCGACAGACAATGGAGGCTGCACGAAACCCTGAACTTATGCGTGAG
ATGATGCGCAATACTGACAGGGCCATGAGCAATATTGAATCTTCTCCTGAGGGATTTAAC
ATGCTGAGGCGTATGTACGAAAATGTCCAAGAGCCACTCCTAAATGCAACAACGTTGTCT
GGAGATACGAGAAATGATGTGGGGTCTAACCCGTTTGCAGCTCTTTTGGGAGCACAAGGT
GGTGGGCAAGGCAGACACCAGTCAAATAATCCTCCAACTTCCGGTTCTGAGACAACTGAT
AATCCGCCTGCTCCTAATACTAATCCACTTCCTAATCCTTGGGCATCTGCAGGCACTGGA
GCTGCCCAAGCCAATACCCCTGCTAGGTCAAATACTGTTGCCGATACTAGGGCTGCACCA
CTTGGTGGCTTAGGTGGACTTGCTTCCCCAGGTTTGGAGCAAATGCTAAGTGGCATGCCA
GATACCACTTCTCTAAATCAAATGATGCAGAACCCTGCGATCTCACAGATGATGCAATCT
CTCCTTTCAAATCCTCAGTACATGAACCAGGTTTTAGGGCTGAACCCACAGCTAAGAAGC
ATGCTCGATTCCAACTCCCATCTTAGAGAAATGATGCAAAATCCTGAGTTTATTCGTCAA
TTGACATCACCTGAGACAATGCAGCAACTTATGACTTTTCAGCATGGGCTTTTGTCTCAA
GCTTGGCGACAGCAAACAAACCAACAAGTGGGTCAAAATGCTGGTGGAGCAGGTGACAAC
GGAATGGAAATGCTGATGAACATGTTTGGTGGACTTGAGACGGGGGGCTTGGGTGTCCCT
AACAGATCTAATGTGCCCCCAGAGGAATTATATGCTACTCAGCTAACTCAGTTACAAGAA
ATGGGTTTCTTTGACACTCAAGAAAATATCCGGGCACTGATTGCCACTGCAGGCAATGTT
CATGCTGCAGTAGAGCGACTTATTGGAAATTCTGGACAGTAG

Peptide Sequence

PEP ID

XP_016475862.1
PEP Infomation

PREDICTED: ubiquitin domain-containing protein DSK2b-like isoform X3 [Nicotiana tabacum]
Sequence

MSMVGGDSNKENNTGAGAGAVAGEGVTINVRCSNGSKFSVKVNLDSTVGSFKSILVQHAN
IPAENQRLIYKGRILKDEQTLESYGLEADHTVHLIRGSGPAPSANPASSTNAGGPNTDQH
APRDAASNVGGPFPGSGLGVSLFPGLGSGGGGGLFGAGLPDFEQVQQQLTQNPNMMRDML
NMPLVQNLMNNPETIRNMIMNNPQMREIMERNPELAHVLNDPATLRQTMEAARNPELMRE
MMRNTDRAMSNIESSPEGFNMLRRMYENVQEPLLNATTLSGDTRNDVGSNPFAALLGAQG
GGQGRHQSNNPPTSGSETTDNPPAPNTNPLPNPWASAGTGAAQANTPARSNTVADTRAAP
LGGLGGLASPGLEQMLSGMPDTTSLNQMMQNPAISQMMQSLLSNPQYMNQVLGLNPQLRS
MLDSNSHLREMMQNPEFIRQLTSPETMQQLMTFQHGLLSQAWRQQTNQQVGQNAGGAGDN
GMEMLMNMFGGLETGGLGVPNRSNVPPEELYATQLTQLQEMGFFDTQENIRALIATAGNV
HAAVERLIGNSGQ

Transcript Sequence

Gene sequence data has not been registered.